Michał Górny b3c221572c sci-biology/biopython: Remove py3.11 (per scipy) ...

Signed-off-by: Michał Górny <mgorny@gentoo.org>

2026-04-18 11:14:01 +02:00

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aaindex

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2025-12-19 10:51:55 +01:00

abyss

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amap

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augustus

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bamtools

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bcftools

sci-biology/bcftools: add 1.23

2026-02-02 17:03:49 +01:00

bedtools

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bfast

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biogrep

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bioperl

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bioperl-db

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bioperl-network

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bioperl-run

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biopython

sci-biology/biopython: Remove py3.11 (per scipy)

2026-04-18 11:14:01 +02:00

biosql

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blat

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bowtie

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bwa

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cd-hit

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2025-12-19 10:51:55 +01:00

clustal-omega

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clustalw

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clustalw-mpi

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cutg

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dialign2

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dialign-tx

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elph

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embassy

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embassy-cbstools

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embassy-clustalomega

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embassy-domainatrix

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embassy-domalign

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2025-12-19 10:51:55 +01:00

embassy-domsearch

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2025-12-19 10:51:55 +01:00

embassy-emnu

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embassy-esim4

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embassy-hmmer

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2025-12-19 10:51:55 +01:00

embassy-iprscan

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2025-12-19 10:51:55 +01:00

embassy-mse

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2025-12-19 10:51:55 +01:00

embassy-phylipnew

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embassy-signature

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embassy-structure

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embassy-topo

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2025-12-19 10:51:55 +01:00

embassy-vienna

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2025-12-19 10:51:55 +01:00

emboss

sci-biology/emboss: fix GCC 15 errors

2026-02-04 15:10:39 +01:00

eugene

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exonerate

*: remove ppc-macos keyword

2025-12-17 16:10:39 +01:00

fasta

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fasttree

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fastx_toolkit

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finchtv

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2025-12-19 10:51:55 +01:00

foldingathome

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glimmer

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glimmerhmm

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gmap

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hmmer

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2025-12-19 10:51:55 +01:00

iedera

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infernal

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iqpnni

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kalign

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kallisto

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2025-12-19 10:51:55 +01:00

lagan

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libgtextutils

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mafft

sci-biology/mafft: fix -Wold-style-definition

2026-03-28 11:34:40 +01:00

maq

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2025-12-19 10:51:55 +01:00

maqview

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mosaik

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mothur

sci-biology/mothur: drop 1.48.0

2026-01-28 19:30:48 +01:00

mrbayes

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2025-12-19 10:51:55 +01:00

mummer

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muscle

sci-biology/muscle: drop 3.8.31

2026-02-22 16:56:48 +01:00

newick-utils

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pals

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paml

sci-biology/paml: add 4.10.10, drop 4.9j

2026-02-11 03:42:08 +00:00

phylip

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2025-12-19 10:51:55 +01:00

phyml

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piler

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pilercr

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plink

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poa

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prank

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primer3

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prints

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probcons

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prodigal

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profphd

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prosite

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2025-12-19 10:51:55 +01:00

pysam

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raxml

sci-biology/raxml: fix C23 build issues

2026-02-11 11:00:41 +01:00

rebase

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2025-12-19 10:51:55 +01:00

recon

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samtools

sci-biology/samtools: add 1.23

2026-02-02 17:03:48 +01:00

seaview

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seqan

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2025-12-19 10:51:55 +01:00

sibsim4

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sim4

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STAR

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stride

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t-coffee

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tree-puzzle

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treeviewx

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trf

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trnascan-se

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uchime

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2025-12-19 10:51:55 +01:00

ucsc-genome-browser

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unafold

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update-blastdb

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2025-12-19 10:51:55 +01:00

vcftools

Quote EPREFIX when used in a parameter expansion

2026-03-07 14:06:17 -05:00

velvet

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wise

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yass

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metadata.xml

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